Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RaraP11416 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.93□□□□□ -0.34
RaraP11416 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.93□□□□□ -0.34
RaraP11416 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RaraP11416 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RaraP11416 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
RaraP11416 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RaraP11416 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RaraP11416 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.93□□□□□ -0.34
RaraP11416 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.93□□□□□ -0.34
RaraP11416 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RaraP11416 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RaraP11416 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.93□□□□□ -0.34
RaraP11416 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.93□□□□□ -0.34
RaraP11416 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
RaraP11416 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RaraP11416 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RaraP11416 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.93□□□□□ -0.34
RaraP11416 Gm8712-201ENSMUST00000221090 701 ntBASIC12.93□□□□□ -0.34
RaraP11416 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
RaraP11416 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RaraP11416 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RaraP11416 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RaraP11416 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
RaraP11416 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RaraP11416 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RaraP11416 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RaraP11416 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RaraP11416 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.92□□□□□ -0.34
RaraP11416 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.92□□□□□ -0.34
RaraP11416 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RaraP11416 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RaraP11416 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RaraP11416 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RaraP11416 Gm13297-201ENSMUST00000120205 934 ntBASIC12.92□□□□□ -0.34
RaraP11416 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RaraP11416 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RaraP11416 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.92□□□□□ -0.34
RaraP11416 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RaraP11416 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.92□□□□□ -0.34
RaraP11416 Gm18054-201ENSMUST00000207539 555 ntBASIC12.92□□□□□ -0.34
RaraP11416 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RaraP11416 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.92□□□□□ -0.34
RaraP11416 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RaraP11416 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RaraP11416 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RaraP11416 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RaraP11416 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RaraP11416 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
RaraP11416 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.92□□□□□ -0.34
RaraP11416 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.92□□□□□ -0.34
RaraP11416 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RaraP11416 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RaraP11416 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RaraP11416 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RaraP11416 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RaraP11416 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.91□□□□□ -0.34
RaraP11416 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.91□□□□□ -0.34
RaraP11416 Gm15370-201ENSMUST00000117158 253 ntBASIC12.91□□□□□ -0.34
RaraP11416 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RaraP11416 Gm6013-201ENSMUST00000212264 699 ntBASIC12.91□□□□□ -0.34
RaraP11416 Gm6991-201ENSMUST00000218475 1178 ntBASIC12.91□□□□□ -0.34
RaraP11416 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.91□□□□□ -0.34
RaraP11416 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.91□□□□□ -0.34
RaraP11416 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.91□□□□□ -0.34
RaraP11416 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.91□□□□□ -0.34
RaraP11416 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RaraP11416 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.91□□□□□ -0.34
RaraP11416 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.91□□□□□ -0.34
RaraP11416 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RaraP11416 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RaraP11416 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.9□□□□□ -0.34
RaraP11416 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RaraP11416 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RaraP11416 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RaraP11416 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RaraP11416 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RaraP11416 Gm14644-201ENSMUST00000116671 647 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms