Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
UbbP0CG49 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.43□□□□□ -0.74
UbbP0CG49 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.43□□□□□ -0.74
UbbP0CG49 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.43□□□□□ -0.74
UbbP0CG49 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
UbbP0CG49 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
UbbP0CG49 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.42□□□□□ -0.74
UbbP0CG49 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.42□□□□□ -0.74
UbbP0CG49 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
UbbP0CG49 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
UbbP0CG49 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.42□□□□□ -0.74
UbbP0CG49 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.42□□□□□ -0.74
UbbP0CG49 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.42□□□□□ -0.74
UbbP0CG49 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.42□□□□□ -0.74
UbbP0CG49 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.42□□□□□ -0.74
UbbP0CG49 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Gm27682-201ENSMUST00000183930 110 ntBASIC10.42□□□□□ -0.74
UbbP0CG49 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.42□□□□□ -0.74
UbbP0CG49 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.42□□□□□ -0.74
UbbP0CG49 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
UbbP0CG49 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UbbP0CG49 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
UbbP0CG49 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.41□□□□□ -0.74
UbbP0CG49 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
UbbP0CG49 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Gm24934-201ENSMUST00000103764 111 ntBASIC10.41□□□□□ -0.74
UbbP0CG49 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
UbbP0CG49 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.41□□□□□ -0.74
UbbP0CG49 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.41□□□□□ -0.74
UbbP0CG49 Gm1335-201ENSMUST00000121653 386 ntBASIC10.41□□□□□ -0.74
UbbP0CG49 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
UbbP0CG49 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.41□□□□□ -0.74
UbbP0CG49 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
UbbP0CG49 Gm43818-201ENSMUST00000200605 466 ntBASIC10.41□□□□□ -0.74
UbbP0CG49 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.41□□□□□ -0.74
UbbP0CG49 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.41□□□□□ -0.74
UbbP0CG49 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
UbbP0CG49 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
UbbP0CG49 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
UbbP0CG49 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
UbbP0CG49 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
UbbP0CG49 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
UbbP0CG49 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
UbbP0CG49 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UbbP0CG49 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.41□□□□□ -0.74
UbbP0CG49 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms