Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Gm25880-201ENSMUST00000104331 132 ntBASIC11.19□□□□□ -0.62
Sod1P08228 Gm25063-201ENSMUST00000104666 94 ntBASIC11.19□□□□□ -0.62
Sod1P08228 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Sod1P08228 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.19□□□□□ -0.62
Sod1P08228 Gm11340-201ENSMUST00000119226 412 ntBASIC11.19□□□□□ -0.62
Sod1P08228 Gm23218-201ENSMUST00000158124 276 ntBASIC11.19□□□□□ -0.62
Sod1P08228 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.19□□□□□ -0.62
Sod1P08228 Gm6407-201ENSMUST00000176468 549 ntBASIC11.19□□□□□ -0.62
Sod1P08228 Gm26134-201ENSMUST00000178484 110 ntBASIC11.19□□□□□ -0.62
Sod1P08228 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sod1P08228 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.19□□□□□ -0.62
Sod1P08228 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.19□□□□□ -0.62
Sod1P08228 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sod1P08228 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Sod1P08228 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.19□□□□□ -0.62
Sod1P08228 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Sod1P08228 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sod1P08228 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sod1P08228 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.18□□□□□ -0.62
Sod1P08228 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 Gm12628-201ENSMUST00000122193 382 ntBASIC11.18□□□□□ -0.62
Sod1P08228 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.18□□□□□ -0.62
Sod1P08228 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.18□□□□□ -0.62
Sod1P08228 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sod1P08228 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.18□□□□□ -0.62
Sod1P08228 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.18□□□□□ -0.62
Sod1P08228 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.18□□□□□ -0.62
Sod1P08228 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.18□□□□□ -0.62
Sod1P08228 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sod1P08228 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.18□□□□□ -0.62
Sod1P08228 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.17□□□□□ -0.62
Sod1P08228 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sod1P08228 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.17□□□□□ -0.62
Sod1P08228 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.17□□□□□ -0.62
Sod1P08228 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Sod1P08228 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sod1P08228 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.17□□□□□ -0.62
Sod1P08228 Gm9139-201ENSMUST00000218817 700 ntBASIC11.17□□□□□ -0.62
Sod1P08228 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.17□□□□□ -0.62
Sod1P08228 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.17□□□□□ -0.62
Sod1P08228 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 252.5 ms