Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Gm13296-201ENSMUST00000117854 997 ntBASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Gm43179-201ENSMUST00000198797 275 ntBASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Gm45331-201ENSMUST00000209868 554 ntBASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.33□□□□□ -0.76
Igh-VJ558P01758 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igh-VJ558P01758 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Gm11700-201ENSMUST00000119409 403 ntBASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Gm11960-201ENSMUST00000122068 925 ntBASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Gm25700-201ENSMUST00000177693 110 ntBASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.32□□□□□ -0.76
Igh-VJ558P01758 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Igh-VJ558P01758 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms