Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cops4O88544 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.04□□□□□ -0.64
Cops4O88544 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.04□□□□□ -0.64
Cops4O88544 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.04□□□□□ -0.64
Cops4O88544 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.04□□□□□ -0.64
Cops4O88544 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.04□□□□□ -0.64
Cops4O88544 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cops4O88544 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cops4O88544 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.04□□□□□ -0.64
Cops4O88544 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.04□□□□□ -0.64
Cops4O88544 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.04□□□□□ -0.64
Cops4O88544 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.04□□□□□ -0.64
Cops4O88544 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.04□□□□□ -0.64
Cops4O88544 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.04□□□□□ -0.64
Cops4O88544 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.04□□□□□ -0.64
Cops4O88544 Gm6007-201ENSMUST00000208170 823 ntBASIC11.04□□□□□ -0.64
Cops4O88544 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.04□□□□□ -0.64
Cops4O88544 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cops4O88544 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cops4O88544 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cops4O88544 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Cops4O88544 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cops4O88544 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.04□□□□□ -0.64
Cops4O88544 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cops4O88544 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cops4O88544 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Cops4O88544 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Cops4O88544 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cops4O88544 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cops4O88544 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.03□□□□□ -0.64
Cops4O88544 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cops4O88544 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cops4O88544 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.03□□□□□ -0.64
Cops4O88544 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cops4O88544 Gm4984-201ENSMUST00000115987 360 ntBASIC11.03□□□□□ -0.64
Cops4O88544 Gm9083-201ENSMUST00000120423 819 ntBASIC11.03□□□□□ -0.64
Cops4O88544 Gm11964-201ENSMUST00000120982 444 ntBASIC11.03□□□□□ -0.64
Cops4O88544 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.03□□□□□ -0.64
Cops4O88544 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.03□□□□□ -0.64
Cops4O88544 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.03□□□□□ -0.64
Cops4O88544 Gm23119-201ENSMUST00000158610 140 ntBASIC11.03□□□□□ -0.64
Cops4O88544 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.03□□□□□ -0.64
Cops4O88544 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Gm38092-201ENSMUST00000195600 653 ntBASIC11.03□□□□□ -0.64
Cops4O88544 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.03□□□□□ -0.64
Cops4O88544 Gm7561-201ENSMUST00000211203 886 ntBASIC11.03□□□□□ -0.64
Cops4O88544 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.03□□□□□ -0.64
Cops4O88544 Gm32025-201ENSMUST00000217960 307 ntBASIC11.03□□□□□ -0.64
Cops4O88544 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cops4O88544 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.03□□□□□ -0.64
Cops4O88544 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
Cops4O88544 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Cops4O88544 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.03□□□□□ -0.64
Cops4O88544 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cops4O88544 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cops4O88544 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cops4O88544 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms