Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.87□□□□□ -0.51
Pdlim1O70400 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.87□□□□□ -0.51
Pdlim1O70400 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.86□□□□□ -0.51
Pdlim1O70400 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Pdlim1O70400 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Gm15004-201ENSMUST00000119192 630 ntBASIC11.86□□□□□ -0.51
Pdlim1O70400 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Pdlim1O70400 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Gm2260-201ENSMUST00000184965 657 ntBASIC11.86□□□□□ -0.51
Pdlim1O70400 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.86□□□□□ -0.51
Pdlim1O70400 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pdlim1O70400 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Gm2553-201ENSMUST00000215986 605 ntBASIC11.86□□□□□ -0.51
Pdlim1O70400 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.86□□□□□ -0.51
Pdlim1O70400 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Mir433-201ENSMUST00000093564 124 ntBASIC11.86□□□□□ -0.51
Pdlim1O70400 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pdlim1O70400 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.86□□□□□ -0.51
Pdlim1O70400 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.86□□□□□ -0.51
Pdlim1O70400 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.86□□□□□ -0.51
Pdlim1O70400 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.86□□□□□ -0.51
Pdlim1O70400 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Pdlim1O70400 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdlim1O70400 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.86□□□□□ -0.51
Pdlim1O70400 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pdlim1O70400 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pdlim1O70400 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pdlim1O70400 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pdlim1O70400 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pdlim1O70400 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.85□□□□□ -0.51
Pdlim1O70400 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Pdlim1O70400 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Pdlim1O70400 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Pdlim1O70400 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.85□□□□□ -0.51
Pdlim1O70400 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.85□□□□□ -0.51
Pdlim1O70400 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Gm12380-201ENSMUST00000119012 544 ntBASIC11.85□□□□□ -0.51
Pdlim1O70400 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.85□□□□□ -0.51
Pdlim1O70400 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.85□□□□□ -0.51
Pdlim1O70400 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Gm7003-201ENSMUST00000195089 312 ntBASIC11.85□□□□□ -0.51
Pdlim1O70400 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.85□□□□□ -0.51
Pdlim1O70400 Gm18730-201ENSMUST00000218038 343 ntBASIC11.85□□□□□ -0.51
Pdlim1O70400 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pdlim1O70400 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Gm26448-201ENSMUST00000082446 203 ntBASIC11.85□□□□□ -0.51
Pdlim1O70400 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pdlim1O70400 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdlim1O70400 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms