Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm23699-201ENSMUST00000158835 135 ntBASIC12.68□□□□□ -0.38
Itgb3O54890 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Itgb3O54890 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.68□□□□□ -0.38
Itgb3O54890 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Itgb3O54890 Gm2965-201ENSMUST00000198365 343 ntBASIC12.68□□□□□ -0.38
Itgb3O54890 Gm43378-201ENSMUST00000199336 582 ntBASIC12.68□□□□□ -0.38
Itgb3O54890 Gm9555-201ENSMUST00000200908 583 ntBASIC12.68□□□□□ -0.38
Itgb3O54890 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.68□□□□□ -0.38
Itgb3O54890 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.68□□□□□ -0.38
Itgb3O54890 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.68□□□□□ -0.38
Itgb3O54890 Spcs1-203ENSMUST00000226374 592 ntBASIC12.68□□□□□ -0.38
Itgb3O54890 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.68□□□□□ -0.38
Itgb3O54890 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.68□□□□□ -0.38
Itgb3O54890 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.68□□□□□ -0.38
Itgb3O54890 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Itgb3O54890 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.67□□□□□ -0.38
Itgb3O54890 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Itgb3O54890 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Itgb3O54890 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Itgb3O54890 Gm11663-201ENSMUST00000117888 290 ntBASIC12.67□□□□□ -0.38
Itgb3O54890 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Itgb3O54890 Gm11941-201ENSMUST00000119904 610 ntBASIC12.67□□□□□ -0.38
Itgb3O54890 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.67□□□□□ -0.38
Itgb3O54890 Gm23085-201ENSMUST00000157849 293 ntBASIC12.67□□□□□ -0.38
Itgb3O54890 Gm20426-201ENSMUST00000173657 440 ntBASIC12.67□□□□□ -0.38
Itgb3O54890 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.67□□□□□ -0.38
Itgb3O54890 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.67□□□□□ -0.38
Itgb3O54890 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Gm37246-201ENSMUST00000192665 835 ntBASIC12.67□□□□□ -0.38
Itgb3O54890 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.67□□□□□ -0.38
Itgb3O54890 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Itgb3O54890 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.67□□□□□ -0.38
Itgb3O54890 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.67□□□□□ -0.38
Itgb3O54890 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Itgb3O54890 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Itgb3O54890 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Itgb3O54890 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Itgb3O54890 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Itgb3O54890 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.66□□□□□ -0.38
Itgb3O54890 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Itgb3O54890 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.66□□□□□ -0.38
Itgb3O54890 Gm23251-201ENSMUST00000103773 110 ntBASIC12.66□□□□□ -0.38
Itgb3O54890 Gm24891-201ENSMUST00000104391 136 ntBASIC12.66□□□□□ -0.38
Itgb3O54890 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.66□□□□□ -0.38
Itgb3O54890 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.66□□□□□ -0.38
Itgb3O54890 Gm8199-201ENSMUST00000121323 823 ntBASIC12.66□□□□□ -0.38
Itgb3O54890 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Itgb3O54890 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Gm4310-201ENSMUST00000177847 889 ntBASIC12.66□□□□□ -0.38
Itgb3O54890 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Itgb3O54890 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Gm9136-201ENSMUST00000193368 454 ntBASIC12.66□□□□□ -0.38
Itgb3O54890 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Itgb3O54890 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Itgb3O54890 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.66□□□□□ -0.38
Itgb3O54890 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms