Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Efnb3O35393 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Efnb3O35393 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Efnb3O35393 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Efnb3O35393 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Efnb3O35393 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Efnb3O35393 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Efnb3O35393 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Efnb3O35393 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Efnb3O35393 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Efnb3O35393 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Efnb3O35393 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.46□□□□□ -0.9
Efnb3O35393 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.46□□□□□ -0.9
Efnb3O35393 Gm26927-201ENSMUST00000182385 965 ntBASIC9.46□□□□□ -0.9
Efnb3O35393 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Gm18062-201ENSMUST00000208020 547 ntBASIC9.46□□□□□ -0.9
Efnb3O35393 Gm18055-201ENSMUST00000208254 547 ntBASIC9.46□□□□□ -0.9
Efnb3O35393 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.46□□□□□ -0.9
Efnb3O35393 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.46□□□□□ -0.9
Efnb3O35393 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Gm45930-201ENSMUST00000221330 292 ntBASIC9.46□□□□□ -0.9
Efnb3O35393 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC9.46□□□□□ -0.9
Efnb3O35393 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.46□□□□□ -0.9
Efnb3O35393 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Efnb3O35393 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 BC043934-202ENSMUST00000185694 2356 ntBASIC9.46□□□□□ -0.9
Efnb3O35393 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.46□□□□□ -0.9
Efnb3O35393 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
Efnb3O35393 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Efnb3O35393 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Efnb3O35393 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Efnb3O35393 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.45□□□□□ -0.9
Efnb3O35393 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Efnb3O35393 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.45□□□□□ -0.9
Efnb3O35393 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Efnb3O35393 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Efnb3O35393 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Gm23912-201ENSMUST00000104687 87 ntBASIC9.45□□□□□ -0.9
Efnb3O35393 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.45□□□□□ -0.9
Efnb3O35393 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.45□□□□□ -0.9
Efnb3O35393 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Gm45784-201ENSMUST00000188360 142 ntBASIC9.45□□□□□ -0.9
Efnb3O35393 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.45□□□□□ -0.9
Efnb3O35393 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.45□□□□□ -0.9
Efnb3O35393 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Efnb3O35393 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.45□□□□□ -0.9
Efnb3O35393 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Efnb3O35393 Gm25857-201ENSMUST00000082788 129 ntBASIC9.45□□□□□ -0.9
Efnb3O35393 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Gm7553-201ENSMUST00000185805 1426 ntBASIC9.45□□□□□ -0.9
Efnb3O35393 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Efnb3O35393 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Efnb3O35393 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.45□□□□□ -0.9
Efnb3O35393 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Efnb3O35393 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.45□□□□□ -0.9
Efnb3O35393 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Efnb3O35393 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Efnb3O35393 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Efnb3O35393 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.44□□□□□ -0.9
Efnb3O35393 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms