Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.32□□□□□ -0.44
Trove2O08848 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trove2O08848 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trove2O08848 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trove2O08848 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trove2O08848 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Trove2O08848 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trove2O08848 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trove2O08848 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.31□□□□□ -0.44
Trove2O08848 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.31□□□□□ -0.44
Trove2O08848 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.31□□□□□ -0.44
Trove2O08848 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.31□□□□□ -0.44
Trove2O08848 Gm18165-201ENSMUST00000217426 928 ntBASIC12.31□□□□□ -0.44
Trove2O08848 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.31□□□□□ -0.44
Trove2O08848 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.31□□□□□ -0.44
Trove2O08848 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Trove2O08848 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.31□□□□□ -0.44
Trove2O08848 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trove2O08848 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.31□□□□□ -0.44
Trove2O08848 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.31□□□□□ -0.44
Trove2O08848 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.31□□□□□ -0.44
Trove2O08848 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trove2O08848 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trove2O08848 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.3□□□□□ -0.44
Trove2O08848 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.3□□□□□ -0.44
Trove2O08848 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trove2O08848 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.3□□□□□ -0.44
Trove2O08848 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.3□□□□□ -0.44
Trove2O08848 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trove2O08848 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.3□□□□□ -0.44
Trove2O08848 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.3□□□□□ -0.44
Trove2O08848 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trove2O08848 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trove2O08848 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.3□□□□□ -0.44
Trove2O08848 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trove2O08848 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
Trove2O08848 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.3□□□□□ -0.44
Trove2O08848 Gm12384-201ENSMUST00000119228 919 ntBASIC12.3□□□□□ -0.44
Trove2O08848 Gm18187-201ENSMUST00000196476 984 ntBASIC12.3□□□□□ -0.44
Trove2O08848 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.3□□□□□ -0.44
Trove2O08848 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.3□□□□□ -0.44
Trove2O08848 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.3□□□□□ -0.44
Trove2O08848 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.3□□□□□ -0.44
Trove2O08848 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.3□□□□□ -0.44
Trove2O08848 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trove2O08848 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trove2O08848 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Gm24526-201ENSMUST00000082921 158 ntBASIC12.3□□□□□ -0.44
Trove2O08848 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.3□□□□□ -0.44
Trove2O08848 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.3□□□□□ -0.44
Trove2O08848 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms