Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ebf3O08791 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ebf3O08791 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ebf3O08791 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf3O08791 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.48□□□□□ -0.41
Ebf3O08791 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ebf3O08791 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ebf3O08791 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.47□□□□□ -0.41
Ebf3O08791 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ebf3O08791 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ebf3O08791 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Ebf3O08791 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.47□□□□□ -0.41
Ebf3O08791 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.47□□□□□ -0.41
Ebf3O08791 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Gm5733-201ENSMUST00000190232 939 ntBASIC12.47□□□□□ -0.41
Ebf3O08791 Gm43184-201ENSMUST00000197247 542 ntBASIC12.47□□□□□ -0.41
Ebf3O08791 Gm4482-201ENSMUST00000200876 742 ntBASIC12.47□□□□□ -0.41
Ebf3O08791 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.47□□□□□ -0.41
Ebf3O08791 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.47□□□□□ -0.41
Ebf3O08791 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.47□□□□□ -0.41
Ebf3O08791 Gm807-202ENSMUST00000224929 408 ntBASIC12.47□□□□□ -0.41
Ebf3O08791 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.47□□□□□ -0.41
Ebf3O08791 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.47□□□□□ -0.41
Ebf3O08791 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.47□□□□□ -0.41
Ebf3O08791 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ebf3O08791 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.47□□□□□ -0.41
Ebf3O08791 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.47□□□□□ -0.41
Ebf3O08791 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.47□□□□□ -0.41
Ebf3O08791 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.47□□□□□ -0.41
Ebf3O08791 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf3O08791 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Ebf3O08791 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.46□□□□□ -0.41
Ebf3O08791 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Ebf3O08791 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ebf3O08791 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ebf3O08791 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.46□□□□□ -0.41
Ebf3O08791 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.46□□□□□ -0.41
Ebf3O08791 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Gm3332-201ENSMUST00000189337 928 ntBASIC12.46□□□□□ -0.41
Ebf3O08791 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.46□□□□□ -0.41
Ebf3O08791 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ebf3O08791 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ebf3O08791 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Ebf3O08791 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.46□□□□□ -0.41
Ebf3O08791 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.46□□□□□ -0.41
Ebf3O08791 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.46□□□□□ -0.41
Ebf3O08791 Gm10179-201ENSMUST00000086233 688 ntBASIC12.46□□□□□ -0.41
Ebf3O08791 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ebf3O08791 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf3O08791 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ebf3O08791 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Ebf3O08791 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf3O08791 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf3O08791 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf3O08791 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf3O08791 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf3O08791 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf3O08791 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf3O08791 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf3O08791 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf3O08791 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf3O08791 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf3O08791 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf3O08791 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms