Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
AlyrefO08583 Gm44387-201ENSMUST00000196298 145 ntBASIC12.24□□□□□ -0.45
AlyrefO08583 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.24□□□□□ -0.45
AlyrefO08583 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.24□□□□□ -0.45
AlyrefO08583 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.24□□□□□ -0.45
AlyrefO08583 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AlyrefO08583 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.23□□□□□ -0.45
AlyrefO08583 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
AlyrefO08583 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.23□□□□□ -0.45
AlyrefO08583 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
AlyrefO08583 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.23□□□□□ -0.45
AlyrefO08583 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.23□□□□□ -0.45
AlyrefO08583 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
AlyrefO08583 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
AlyrefO08583 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.23□□□□□ -0.45
AlyrefO08583 Gm13351-201ENSMUST00000118087 414 ntBASIC12.23□□□□□ -0.45
AlyrefO08583 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.23□□□□□ -0.45
AlyrefO08583 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.23□□□□□ -0.45
AlyrefO08583 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC12.23□□□□□ -0.45
AlyrefO08583 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC12.23□□□□□ -0.45
AlyrefO08583 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.23□□□□□ -0.45
AlyrefO08583 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.23□□□□□ -0.45
AlyrefO08583 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.23□□□□□ -0.45
AlyrefO08583 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.23□□□□□ -0.45
AlyrefO08583 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AlyrefO08583 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
AlyrefO08583 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
AlyrefO08583 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.22□□□□□ -0.45
AlyrefO08583 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
AlyrefO08583 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
AlyrefO08583 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
AlyrefO08583 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AlyrefO08583 Gm14542-201ENSMUST00000118460 1248 ntBASIC12.22□□□□□ -0.45
AlyrefO08583 Gm25318-201ENSMUST00000122554 314 ntBASIC12.22□□□□□ -0.45
AlyrefO08583 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.22□□□□□ -0.45
AlyrefO08583 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.22□□□□□ -0.45
AlyrefO08583 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
AlyrefO08583 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
AlyrefO08583 Gm20414-201ENSMUST00000172918 646 ntBASIC12.22□□□□□ -0.45
AlyrefO08583 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.22□□□□□ -0.45
AlyrefO08583 Mir8115-201ENSMUST00000184992 119 ntBASIC12.22□□□□□ -0.45
AlyrefO08583 Gm5700-201ENSMUST00000191483 989 ntBASIC12.22□□□□□ -0.45
AlyrefO08583 Gm2965-201ENSMUST00000198365 343 ntBASIC12.22□□□□□ -0.45
AlyrefO08583 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms