Protein–RNA interactions for Protein: O08547

Sec22b, Vesicle-trafficking protein SEC22b, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22bO08547 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec22bO08547 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec22bO08547 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec22bO08547 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec22bO08547 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec22bO08547 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec22bO08547 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec22bO08547 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.83□□□□□ -0.52
Sec22bO08547 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec22bO08547 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec22bO08547 Rgr-203ENSMUST00000225070 4704 ntBASIC11.82□□□□□ -0.52
Sec22bO08547 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sec22bO08547 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.82□□□□□ -0.52
Sec22bO08547 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.82□□□□□ -0.52
Sec22bO08547 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sec22bO08547 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.82□□□□□ -0.52
Sec22bO08547 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Gm13392-201ENSMUST00000117708 150 ntBASIC11.82□□□□□ -0.52
Sec22bO08547 Gm14247-201ENSMUST00000120950 237 ntBASIC11.82□□□□□ -0.52
Sec22bO08547 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.82□□□□□ -0.52
Sec22bO08547 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.82□□□□□ -0.52
Sec22bO08547 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.82□□□□□ -0.52
Sec22bO08547 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.82□□□□□ -0.52
Sec22bO08547 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.82□□□□□ -0.52
Sec22bO08547 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.82□□□□□ -0.52
Sec22bO08547 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.82□□□□□ -0.52
Sec22bO08547 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Gm10312-201ENSMUST00000078515 489 ntBASIC11.82□□□□□ -0.52
Sec22bO08547 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sec22bO08547 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sec22bO08547 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec22bO08547 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sec22bO08547 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.81□□□□□ -0.52
Sec22bO08547 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Sec22bO08547 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.81□□□□□ -0.52
Sec22bO08547 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Gm12241-201ENSMUST00000118330 726 ntBASIC11.81□□□□□ -0.52
Sec22bO08547 Gm15610-201ENSMUST00000120584 195 ntBASIC11.81□□□□□ -0.52
Sec22bO08547 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.81□□□□□ -0.52
Sec22bO08547 Gm27501-201ENSMUST00000183599 107 ntBASIC11.81□□□□□ -0.52
Sec22bO08547 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.81□□□□□ -0.52
Sec22bO08547 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sec22bO08547 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sec22bO08547 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.81□□□□□ -0.52
Sec22bO08547 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sec22bO08547 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sec22bO08547 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sec22bO08547 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sec22bO08547 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sec22bO08547 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sec22bO08547 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Sec22bO08547 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sec22bO08547 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sec22bO08547 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Sec22bO08547 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Sec22bO08547 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms