Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Shisa8J3QNX5 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Shisa8J3QNX5 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Shisa8J3QNX5 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Shisa8J3QNX5 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.9□□□□□ -0.67
Shisa8J3QNX5 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Shisa8J3QNX5 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Shisa8J3QNX5 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Shisa8J3QNX5 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Erich3-203ENSMUST00000189969 3460 ntBASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Gm11814-201ENSMUST00000119515 929 ntBASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Gm13342-201ENSMUST00000121055 207 ntBASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Gm27892-201ENSMUST00000185017 106 ntBASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Gm5904-201ENSMUST00000210286 865 ntBASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Gm10268-201ENSMUST00000085340 555 ntBASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Shisa8J3QNX5 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.89□□□□□ -0.67
Shisa8J3QNX5 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Gm27839-201ENSMUST00000184242 106 ntBASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Gm6091-201ENSMUST00000098307 165 ntBASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.88□□□□□ -0.67
Shisa8J3QNX5 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms