Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Gm9899-201ENSMUST00000065519 555 ntBASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh9F8VPK8 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Gm7722-201ENSMUST00000120646 741 ntBASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdh9F8VPK8 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gm12241-201ENSMUST00000118330 726 ntBASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gm18893-201ENSMUST00000198416 943 ntBASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh9F8VPK8 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.23□□□□□ -0.45
Pcdh9F8VPK8 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms