Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Mir7677-201ENSMUST00000184226 67 ntBASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Gm6644-201ENSMUST00000186507 951 ntBASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Gm45481-201ENSMUST00000209717 877 ntBASIC13.49□□□□□ -0.25
Syngap1F6SEU4 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syngap1F6SEU4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Gm12196-201ENSMUST00000120954 262 ntBASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Gm9022-201ENSMUST00000182482 992 ntBASIC13.48□□□□□ -0.25
Syngap1F6SEU4 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Gm37299-201ENSMUST00000193951 826 ntBASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.48□□□□□ -0.25
Syngap1F6SEU4 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Gm270-201ENSMUST00000223010 976 ntBASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 AC137950.2-202ENSMUST00000227150 1635 ntBASIC13.48□□□□□ -0.25
Syngap1F6SEU4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Syngap1F6SEU4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Gm23085-201ENSMUST00000157849 293 ntBASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Gm18201-201ENSMUST00000174735 875 ntBASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Gm3332-201ENSMUST00000189337 928 ntBASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Gm9136-201ENSMUST00000193368 454 ntBASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Gm44329-201ENSMUST00000197469 112 ntBASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Gm44958-201ENSMUST00000203734 736 ntBASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Gm44980-201ENSMUST00000205826 314 ntBASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Gm18059-201ENSMUST00000208073 580 ntBASIC13.47□□□□□ -0.25
Syngap1F6SEU4 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Gm5599-201ENSMUST00000209602 788 ntBASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Gm4604-201ENSMUST00000025040 390 ntBASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syngap1F6SEU4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms