Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Gm3287-205ENSMUST00000228893 1332 ntBASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.65□□□□□ -0.86
Gm12887B1AVM1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm12887B1AVM1 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Gm12887B1AVM1 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gm12887B1AVM1 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Gm12887B1AVM1 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.65□□□□□ -0.87
Gm12887B1AVM1 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.65□□□□□ -0.87
Gm12887B1AVM1 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Gm12887B1AVM1 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gm12887B1AVM1 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gm12887B1AVM1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC9.65□□□□□ -0.87
Gm12887B1AVM1 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Gm12314-201ENSMUST00000118104 538 ntBASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Gm11803-201ENSMUST00000119966 444 ntBASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm12887B1AVM1 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms