Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 BC043934-202ENSMUST00000185694 2356 ntBASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav12d-1A0N8R0 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Gm11700-201ENSMUST00000119409 403 ntBASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav12d-1A0N8R0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav12d-1A0N8R0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav12d-1A0N8R0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav12d-1A0N8R0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav12d-1A0N8R0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav12d-1A0N8R0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav12d-1A0N8R0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms