Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm15610-201ENSMUST00000120584 195 ntBASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm14832-201ENSMUST00000121289 322 ntBASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm5706-201ENSMUST00000181525 993 ntBASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm38002-201ENSMUST00000193255 180 ntBASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm42627-201ENSMUST00000197347 224 ntBASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm45880-201ENSMUST00000213041 853 ntBASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.91□□□□□ -0.5
Ccdc194A0A140LIT1 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Gm5187-201ENSMUST00000117317 991 ntBASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Gm37489-201ENSMUST00000191883 159 ntBASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc194A0A140LIT1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc194A0A140LIT1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc194A0A140LIT1 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc194A0A140LIT1 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Ccdc194A0A140LIT1 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc194A0A140LIT1 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.89□□□□□ -0.51
Ccdc194A0A140LIT1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms