Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Gm13223-201ENSMUST00000118609 747 ntBASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Gm37171-201ENSMUST00000192636 1185 ntBASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Gm9797-201ENSMUST00000052902 613 ntBASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Gm9755-201ENSMUST00000032981 1356 ntBASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 AC154171.2-201ENSMUST00000225219 2652 ntBASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Gm45191-201ENSMUST00000205846 5439 ntBASIC8.55□□□□□ -1.04
Trav8-1A0A075B641 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Gm12416-201ENSMUST00000120911 1008 ntBASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Gm38223-201ENSMUST00000194484 695 ntBASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 142.9 ms