Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Gm5370-201ENSMUST00000187187 574 ntBASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.81□□□□□ -0.68
H2afb3S4R1G7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
H2afb3S4R1G7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
H2afb3S4R1G7 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms