Protein–RNA interactions for Protein: Q9Z0Z3

Skp2, S-phase kinase-associated protein 2, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skp2Q9Z0Z3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Skp2Q9Z0Z3 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Gm24934-201ENSMUST00000103764 111 ntBASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Gm13226-201ENSMUST00000117838 404 ntBASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Gm12058-201ENSMUST00000118614 437 ntBASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Gm13316-201ENSMUST00000140537 691 ntBASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Gm13570-201ENSMUST00000140763 309 ntBASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Gm45784-201ENSMUST00000188360 142 ntBASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Skp2Q9Z0Z3 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Skp2Q9Z0Z3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Skp2Q9Z0Z3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Skp2Q9Z0Z3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Skp2Q9Z0Z3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Skp2Q9Z0Z3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Skp2Q9Z0Z3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Skp2Q9Z0Z3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Skp2Q9Z0Z3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Skp2Q9Z0Z3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Skp2Q9Z0Z3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms