Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm12015-201ENSMUST00000117065 843 ntBASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Gm13350-201ENSMUST00000120519 479 ntBASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Gm14363-201ENSMUST00000122304 409 ntBASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Gm4034-201ENSMUST00000187674 480 ntBASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Gm37259-201ENSMUST00000193903 849 ntBASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf40aQ9R1C7 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Gm13366-201ENSMUST00000122198 970 ntBASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Gm25668-201ENSMUST00000157700 129 ntBASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Gm8885-201ENSMUST00000189382 598 ntBASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Gm13097-201ENSMUST00000210722 397 ntBASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.23□□□□□ -0.29
Prpf40aQ9R1C7 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms