Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Gm7857-201ENSMUST00000117957 358 ntBASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Gm17812-201ENSMUST00000204935 318 ntBASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Gm45433-201ENSMUST00000209386 247 ntBASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Clcf1Q9QZM3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Clcf1Q9QZM3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Clcf1Q9QZM3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Clcf1Q9QZM3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.9□□□□□ -0.67
Clcf1Q9QZM3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Clcf1Q9QZM3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Clcf1Q9QZM3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Clcf1Q9QZM3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms