Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm37259-201ENSMUST00000193903 849 ntBASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Map1b-203ENSMUST00000223725 2669 ntBASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Gm24830-201ENSMUST00000102024 166 ntBASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Gm28882-201ENSMUST00000185504 314 ntBASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Gm42937-201ENSMUST00000197360 752 ntBASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Gm26232-201ENSMUST00000083360 166 ntBASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61a2Q9JLR1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Gm24934-201ENSMUST00000103764 111 ntBASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Gm23270-201ENSMUST00000104055 131 ntBASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Gm24255-201ENSMUST00000104481 128 ntBASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Gm17376-201ENSMUST00000166016 84 ntBASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Gm26956-201ENSMUST00000182176 986 ntBASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Gm42599-201ENSMUST00000201308 469 ntBASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 Gm21769-201ENSMUST00000211922 111 ntBASIC10.81□□□□□ -0.68
Sec61a2Q9JLR1 AC073947.1-201ENSMUST00000216991 649 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms