Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Gm44882-201ENSMUST00000205702 802 ntBASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Gm42690-201ENSMUST00000197921 1836 ntBASIC9.56□□□□□ -0.88
Smco4Q9JIS3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Gm13126-201ENSMUST00000117079 3063 ntBASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Gm12585-201ENSMUST00000117307 290 ntBASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Mir1897-201ENSMUST00000122581 272 ntBASIC9.55□□□□□ -0.88
Smco4Q9JIS3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Smco4Q9JIS3 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Gm12384-201ENSMUST00000119228 919 ntBASIC9.54□□□□□ -0.88
Smco4Q9JIS3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC9.54□□□□□ -0.88
Smco4Q9JIS3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms