Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Gm11783-201ENSMUST00000119549 885 ntBASIC11.84□□□□□ -0.51
OtofQ9ESF1 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Gm15744-201ENSMUST00000161734 213 ntBASIC11.84□□□□□ -0.51
OtofQ9ESF1 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.84□□□□□ -0.51
OtofQ9ESF1 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Gm5982-201ENSMUST00000196234 512 ntBASIC11.84□□□□□ -0.51
OtofQ9ESF1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
OtofQ9ESF1 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
OtofQ9ESF1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
OtofQ9ESF1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
OtofQ9ESF1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.83□□□□□ -0.51
OtofQ9ESF1 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
OtofQ9ESF1 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Gm28388-201ENSMUST00000186262 437 ntBASIC11.83□□□□□ -0.52
OtofQ9ESF1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.83□□□□□ -0.52
OtofQ9ESF1 Gm42599-201ENSMUST00000201308 469 ntBASIC11.83□□□□□ -0.52
OtofQ9ESF1 Gm2875-201ENSMUST00000211333 360 ntBASIC11.83□□□□□ -0.52
OtofQ9ESF1 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.83□□□□□ -0.52
OtofQ9ESF1 Lect2-202ENSMUST00000225183 823 ntBASIC11.83□□□□□ -0.52
OtofQ9ESF1 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.83□□□□□ -0.52
OtofQ9ESF1 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.83□□□□□ -0.52
OtofQ9ESF1 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
OtofQ9ESF1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.82□□□□□ -0.52
OtofQ9ESF1 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.82□□□□□ -0.52
OtofQ9ESF1 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.82□□□□□ -0.52
OtofQ9ESF1 Gm7150-201ENSMUST00000122032 981 ntBASIC11.82□□□□□ -0.52
OtofQ9ESF1 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.82□□□□□ -0.52
OtofQ9ESF1 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.82□□□□□ -0.52
OtofQ9ESF1 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.82□□□□□ -0.52
OtofQ9ESF1 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms