Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Gm44958-201ENSMUST00000203734 736 ntBASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Gm45668-201ENSMUST00000211271 493 ntBASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm13123-201ENSMUST00000122173 492 ntBASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm5866-201ENSMUST00000177881 973 ntBASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm2495-201ENSMUST00000191160 466 ntBASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm38092-201ENSMUST00000195600 653 ntBASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hmgn3Q9DCB1 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Gm11597-201ENSMUST00000121423 964 ntBASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hmgn3Q9DCB1 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms