Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Gm8731-201ENSMUST00000118088 412 ntBASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Gm15610-201ENSMUST00000120584 195 ntBASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Gm4654-201ENSMUST00000183305 982 ntBASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Mir6998-201ENSMUST00000183343 64 ntBASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rrp8Q9DB85 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Gm11675-201ENSMUST00000121873 832 ntBASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Gm22442-201ENSMUST00000157256 144 ntBASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Gm4034-201ENSMUST00000187674 480 ntBASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Gm17877-201ENSMUST00000192578 814 ntBASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Gm5714-201ENSMUST00000197343 566 ntBASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Gm2875-201ENSMUST00000211333 360 ntBASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rrp8Q9DB85 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms