Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
U2af1Q9D883 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
U2af1Q9D883 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
U2af1Q9D883 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
U2af1Q9D883 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.74■□□□□ 0.11
U2af1Q9D883 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
U2af1Q9D883 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.73■□□□□ 0.11
U2af1Q9D883 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
U2af1Q9D883 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC15.73■□□□□ 0.11
U2af1Q9D883 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC15.73■□□□□ 0.11
U2af1Q9D883 CT025624.1-201ENSMUST00000224007 2700 ntBASIC15.73■□□□□ 0.11
U2af1Q9D883 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
U2af1Q9D883 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
U2af1Q9D883 Gm14724-201ENSMUST00000118400 537 ntBASIC15.73■□□□□ 0.11
U2af1Q9D883 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
U2af1Q9D883 Gm4310-201ENSMUST00000177847 889 ntBASIC15.73■□□□□ 0.11
U2af1Q9D883 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
U2af1Q9D883 Gm9555-201ENSMUST00000200908 583 ntBASIC15.73■□□□□ 0.11
U2af1Q9D883 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Matn2-203ENSMUST00000226766 3252 ntBASIC15.73■□□□□ 0.11
U2af1Q9D883 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
U2af1Q9D883 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
U2af1Q9D883 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
U2af1Q9D883 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
U2af1Q9D883 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
U2af1Q9D883 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.72■□□□□ 0.11
U2af1Q9D883 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
U2af1Q9D883 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC15.72■□□□□ 0.11
U2af1Q9D883 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
U2af1Q9D883 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
U2af1Q9D883 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
U2af1Q9D883 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
U2af1Q9D883 Gm7851-201ENSMUST00000117574 323 ntBASIC15.72■□□□□ 0.11
U2af1Q9D883 Gm11663-201ENSMUST00000117888 290 ntBASIC15.72■□□□□ 0.11
U2af1Q9D883 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.72■□□□□ 0.11
U2af1Q9D883 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
U2af1Q9D883 Gm20426-201ENSMUST00000173657 440 ntBASIC15.72■□□□□ 0.11
U2af1Q9D883 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Gm37246-201ENSMUST00000192665 835 ntBASIC15.72■□□□□ 0.11
U2af1Q9D883 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.72■□□□□ 0.11
U2af1Q9D883 AC151275.1-201ENSMUST00000224870 585 ntBASIC15.72■□□□□ 0.11
U2af1Q9D883 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.72■□□□□ 0.11
U2af1Q9D883 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC15.72■□□□□ 0.11
U2af1Q9D883 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
U2af1Q9D883 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC15.72■□□□□ 0.11
U2af1Q9D883 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
U2af1Q9D883 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
U2af1Q9D883 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
U2af1Q9D883 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.71■□□□□ 0.11
U2af1Q9D883 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
U2af1Q9D883 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms