Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Snf8Q9CZ28 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Rprl1-201ENSMUST00000158050 327 ntBASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Gm5706-201ENSMUST00000181525 993 ntBASIC12.33□□□□□ -0.44
Snf8Q9CZ28 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snf8Q9CZ28 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gm25261-201ENSMUST00000157416 134 ntBASIC12.32□□□□□ -0.44
Snf8Q9CZ28 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Gm27731-201ENSMUST00000185192 107 ntBASIC12.32□□□□□ -0.44
Snf8Q9CZ28 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snf8Q9CZ28 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms