Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssr1Q9CY50 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssr1Q9CY50 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssr1Q9CY50 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssr1Q9CY50 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Ssr1Q9CY50 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Gm9083-201ENSMUST00000120423 819 ntBASIC13.08□□□□□ -0.32
Ssr1Q9CY50 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Gm44882-201ENSMUST00000205702 802 ntBASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssr1Q9CY50 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Gm18304-201ENSMUST00000189162 546 ntBASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssr1Q9CY50 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Btrc-209ENSMUST00000224478 2194 ntBASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssr1Q9CY50 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms