Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Gm10076-201ENSMUST00000073238 384 ntBASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Krt88Q9CPR6 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Gm11478-201ENSMUST00000117851 599 ntBASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Gm44405-201ENSMUST00000198952 126 ntBASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.79□□□□□ -0.68
Krt88Q9CPR6 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.79□□□□□ -0.68
Krt88Q9CPR6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms