Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Gm10434-201ENSMUST00000101158 471 ntBASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Gm37008-201ENSMUST00000195712 319 ntBASIC11.29□□□□□ -0.6
Nkd1Q99MH6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Nkd1Q99MH6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm14660-201ENSMUST00000119809 575 ntBASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm12036-201ENSMUST00000120008 530 ntBASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm13875-201ENSMUST00000120162 282 ntBASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.28□□□□□ -0.6
Nkd1Q99MH6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkd1Q99MH6 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms