Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Gm7902-201ENSMUST00000198842 947 ntBASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Gm35713-201ENSMUST00000210516 199 ntBASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx6-1Q99MA9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Gm25063-201ENSMUST00000104666 94 ntBASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Gm11660-201ENSMUST00000120955 412 ntBASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Gm12164-201ENSMUST00000121695 551 ntBASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Gm22119-201ENSMUST00000175594 99 ntBASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx6-1Q99MA9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Gm23912-201ENSMUST00000104687 87 ntBASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Gm15207-201ENSMUST00000119259 442 ntBASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Gm5100-201ENSMUST00000195631 589 ntBASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms