Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Gm37489-201ENSMUST00000191883 159 ntBASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Gm18054-201ENSMUST00000207539 555 ntBASIC11.61□□□□□ -0.55
Cstf3Q99LI7 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cstf3Q99LI7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Gm12957-201ENSMUST00000117835 377 ntBASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.6□□□□□ -0.55
Cstf3Q99LI7 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Gm5706-201ENSMUST00000181525 993 ntBASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Olfr284-202ENSMUST00000206647 966 ntBASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cstf3Q99LI7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Gm13297-201ENSMUST00000120205 934 ntBASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.59□□□□□ -0.55
Cstf3Q99LI7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms