Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Smc1bQ920F6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Gm18893-201ENSMUST00000198416 943 ntBASIC13.9□□□□□ -0.18
Smc1bQ920F6 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.9□□□□□ -0.18
Smc1bQ920F6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Gm39404-201ENSMUST00000216350 313 ntBASIC13.9□□□□□ -0.18
Smc1bQ920F6 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.9□□□□□ -0.18
Smc1bQ920F6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Gm10076-201ENSMUST00000073238 384 ntBASIC13.9□□□□□ -0.18
Smc1bQ920F6 Mir339-201ENSMUST00000083659 96 ntBASIC13.9□□□□□ -0.18
Smc1bQ920F6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smc1bQ920F6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Smc1bQ920F6 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Smc1bQ920F6 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.89□□□□□ -0.19
Smc1bQ920F6 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.89□□□□□ -0.19
Smc1bQ920F6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.89□□□□□ -0.19
Smc1bQ920F6 Gm9358-201ENSMUST00000183067 927 ntBASIC13.89□□□□□ -0.19
Smc1bQ920F6 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Gm38210-201ENSMUST00000191944 809 ntBASIC13.89□□□□□ -0.19
Smc1bQ920F6 Gm18038-201ENSMUST00000197900 485 ntBASIC13.89□□□□□ -0.19
Smc1bQ920F6 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.89□□□□□ -0.19
Smc1bQ920F6 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.89□□□□□ -0.19
Smc1bQ920F6 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.89□□□□□ -0.19
Smc1bQ920F6 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.89□□□□□ -0.19
Smc1bQ920F6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.89□□□□□ -0.19
Smc1bQ920F6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smc1bQ920F6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.88□□□□□ -0.19
Smc1bQ920F6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Gm12501-201ENSMUST00000119163 529 ntBASIC13.88□□□□□ -0.19
Smc1bQ920F6 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.88□□□□□ -0.19
Smc1bQ920F6 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.88□□□□□ -0.19
Smc1bQ920F6 Gm19287-201ENSMUST00000203190 358 ntBASIC13.88□□□□□ -0.19
Smc1bQ920F6 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.88□□□□□ -0.19
Smc1bQ920F6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms