Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Gm12990-201ENSMUST00000120372 468 ntBASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Gm8342-201ENSMUST00000209839 757 ntBASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhac2Q91Y09 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Gm26013-201ENSMUST00000104404 119 ntBASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Gm12628-201ENSMUST00000122193 382 ntBASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Gm8459-201ENSMUST00000162504 760 ntBASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Gm3551-201ENSMUST00000190750 664 ntBASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Gm17877-201ENSMUST00000192578 814 ntBASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Gm44506-201ENSMUST00000206278 965 ntBASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhac2Q91Y09 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhac2Q91Y09 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhac2Q91Y09 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhac2Q91Y09 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhac2Q91Y09 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhac2Q91Y09 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhac2Q91Y09 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.96□□□□□ -0.34
Pcdhac2Q91Y09 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Pcdhac2Q91Y09 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhac2Q91Y09 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhac2Q91Y09 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Pcdhac2Q91Y09 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhac2Q91Y09 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhac2Q91Y09 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhac2Q91Y09 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhac2Q91Y09 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhac2Q91Y09 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms