Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Gm22042-201ENSMUST00000082989 165 ntBASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Gm26110-201ENSMUST00000083971 165 ntBASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb6Q91XZ4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Gm15004-201ENSMUST00000119192 630 ntBASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Gm17376-201ENSMUST00000166016 84 ntBASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb6Q91XZ4 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Gm25668-201ENSMUST00000157700 129 ntBASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Gm5616-201ENSMUST00000165252 384 ntBASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Gm8741-201ENSMUST00000174736 384 ntBASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Olfr582-201ENSMUST00000098212 960 ntBASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb6Q91XZ4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms