Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Gm9368-201ENSMUST00000219348 831 ntBASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdhb8Q91XZ2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Gm27516-201ENSMUST00000184237 98 ntBASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Gm6334-201ENSMUST00000207083 228 ntBASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Gm10312-201ENSMUST00000078515 489 ntBASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb8Q91XZ2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Gm23270-201ENSMUST00000104055 131 ntBASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Gm31256-201ENSMUST00000194705 506 ntBASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb8Q91XZ2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb8Q91XZ2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms