Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trex1Q91XB0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trex1Q91XB0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trex1Q91XB0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trex1Q91XB0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trex1Q91XB0 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trex1Q91XB0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.7□□□□□ -0.22
Trex1Q91XB0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trex1Q91XB0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trex1Q91XB0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trex1Q91XB0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Gm25076-201ENSMUST00000104098 132 ntBASIC13.69□□□□□ -0.22
Trex1Q91XB0 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.69□□□□□ -0.22
Trex1Q91XB0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.69□□□□□ -0.22
Trex1Q91XB0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trex1Q91XB0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm28937-201ENSMUST00000185413 695 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm29400-201ENSMUST00000187208 695 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm28662-201ENSMUST00000188446 695 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm28251-201ENSMUST00000188835 695 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm38210-201ENSMUST00000191944 809 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm37458-201ENSMUST00000194055 410 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm37318-201ENSMUST00000194325 695 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm38017-201ENSMUST00000194768 695 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm37287-201ENSMUST00000195449 695 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm37793-201ENSMUST00000195548 695 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.68□□□□□ -0.22
Trex1Q91XB0 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.68□□□□□ -0.22
Trex1Q91XB0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trex1Q91XB0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms