Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm35960-201ENSMUST00000202712 767 ntBASIC12.49□□□□□ -0.41
Usp3Q91W36 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC12.49□□□□□ -0.41
Usp3Q91W36 Gm45525-201ENSMUST00000210800 389 ntBASIC12.49□□□□□ -0.41
Usp3Q91W36 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.49□□□□□ -0.41
Usp3Q91W36 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.49□□□□□ -0.41
Usp3Q91W36 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.49□□□□□ -0.41
Usp3Q91W36 Gm6562-201ENSMUST00000221903 464 ntBASIC12.49□□□□□ -0.41
Usp3Q91W36 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Usp3Q91W36 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Usp3Q91W36 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Usp3Q91W36 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Usp3Q91W36 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Usp3Q91W36 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Usp3Q91W36 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp3Q91W36 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Usp3Q91W36 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.48□□□□□ -0.41
Usp3Q91W36 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.48□□□□□ -0.41
Usp3Q91W36 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Usp3Q91W36 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Usp3Q91W36 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 BC043934-202ENSMUST00000185694 2356 ntBASIC12.48□□□□□ -0.41
Usp3Q91W36 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.48□□□□□ -0.41
Usp3Q91W36 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.48□□□□□ -0.41
Usp3Q91W36 Gm26286-201ENSMUST00000104166 134 ntBASIC12.48□□□□□ -0.41
Usp3Q91W36 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Usp3Q91W36 Gm15711-201ENSMUST00000118889 535 ntBASIC12.48□□□□□ -0.41
Usp3Q91W36 Gm5419-201ENSMUST00000119301 527 ntBASIC12.48□□□□□ -0.41
Usp3Q91W36 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Usp3Q91W36 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.48□□□□□ -0.41
Usp3Q91W36 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Usp3Q91W36 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Gm28071-201ENSMUST00000190355 478 ntBASIC12.48□□□□□ -0.41
Usp3Q91W36 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.48□□□□□ -0.41
Usp3Q91W36 CT010480.1-201ENSMUST00000223612 363 ntBASIC12.48□□□□□ -0.41
Usp3Q91W36 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.48□□□□□ -0.41
Usp3Q91W36 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.48□□□□□ -0.41
Usp3Q91W36 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.48□□□□□ -0.41
Usp3Q91W36 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.48□□□□□ -0.41
Usp3Q91W36 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp3Q91W36 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.48□□□□□ -0.41
Usp3Q91W36 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp3Q91W36 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp3Q91W36 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.47□□□□□ -0.41
Usp3Q91W36 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp3Q91W36 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp3Q91W36 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp3Q91W36 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp3Q91W36 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.47□□□□□ -0.41
Usp3Q91W36 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp3Q91W36 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Usp3Q91W36 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp3Q91W36 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp3Q91W36 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.47□□□□□ -0.41
Usp3Q91W36 Gm12217-201ENSMUST00000118858 696 ntBASIC12.47□□□□□ -0.41
Usp3Q91W36 Gm15225-201ENSMUST00000120449 1017 ntBASIC12.47□□□□□ -0.41
Usp3Q91W36 Gm11622-201ENSMUST00000120525 691 ntBASIC12.47□□□□□ -0.41
Usp3Q91W36 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp3Q91W36 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.47□□□□□ -0.41
Usp3Q91W36 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.47□□□□□ -0.41
Usp3Q91W36 Gm16570-201ENSMUST00000161951 436 ntBASIC12.47□□□□□ -0.41
Usp3Q91W36 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms