Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Gm18905-201ENSMUST00000205454 928 ntBASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 AC131029.1-201ENSMUST00000226391 2929 ntBASIC14.42□□□□□ -0.1
Ccdc9Q8VC31 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Gm15240-201ENSMUST00000118156 720 ntBASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Gm27772-201ENSMUST00000184900 187 ntBASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc9Q8VC31 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Gm14719-201ENSMUST00000121891 340 ntBASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Gm24694-201ENSMUST00000180054 110 ntBASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Gm27663-201ENSMUST00000184839 110 ntBASIC14.4□□□□□ -0.1
Ccdc9Q8VC31 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms