Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.4□□□□□ -0.58
Ubqln1Q8R317 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.4□□□□□ -0.58
Ubqln1Q8R317 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubqln1Q8R317 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.4□□□□□ -0.59
Ubqln1Q8R317 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ubqln1Q8R317 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ubqln1Q8R317 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ubqln1Q8R317 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.4□□□□□ -0.59
Ubqln1Q8R317 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ubqln1Q8R317 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Ubqln1Q8R317 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm11989-201ENSMUST00000117240 672 ntBASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm11362-201ENSMUST00000118838 850 ntBASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm12036-201ENSMUST00000120008 530 ntBASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm5706-201ENSMUST00000181525 993 ntBASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm27320-201ENSMUST00000184892 109 ntBASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm18827-201ENSMUST00000188341 790 ntBASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm13097-201ENSMUST00000210722 397 ntBASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubqln1Q8R317 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.38□□□□□ -0.59
Ubqln1Q8R317 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubqln1Q8R317 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ubqln1Q8R317 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubqln1Q8R317 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.38□□□□□ -0.59
Ubqln1Q8R317 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubqln1Q8R317 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms