Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc59Q8R2N0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc59Q8R2N0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc59Q8R2N0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc59Q8R2N0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc59Q8R2N0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccdc59Q8R2N0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccdc59Q8R2N0 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccdc59Q8R2N0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ccdc59Q8R2N0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Gm28693-202ENSMUST00000190758 331 ntBASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Gm38002-201ENSMUST00000193255 180 ntBASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Gm4768-201ENSMUST00000206199 686 ntBASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.39□□□□□ -0.59
Ccdc59Q8R2N0 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Gm16479-201ENSMUST00000121706 932 ntBASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Snora73a-201ENSMUST00000082453 205 ntBASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc59Q8R2N0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc59Q8R2N0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc59Q8R2N0 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.37□□□□□ -0.59
Ccdc59Q8R2N0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc59Q8R2N0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc59Q8R2N0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ccdc59Q8R2N0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc59Q8R2N0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms