Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ebf4Q8K4J2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Gm12363-201ENSMUST00000122250 668 ntBASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Proscos-202ENSMUST00000178990 666 ntBASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Gm2495-201ENSMUST00000191160 466 ntBASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Gm37922-201ENSMUST00000195596 455 ntBASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Gm42693-201ENSMUST00000196779 631 ntBASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Gm19220-201ENSMUST00000222682 803 ntBASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Gm10254-201ENSMUST00000052888 867 ntBASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Erich3-203ENSMUST00000189969 3460 ntBASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf4Q8K4J2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms