Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Gm5419-201ENSMUST00000119301 527 ntBASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Gm12164-201ENSMUST00000121695 551 ntBASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.17□□□□□ -0.14
Cchcr1Q8K2I2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gm12015-201ENSMUST00000117065 843 ntBASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gm15370-201ENSMUST00000117158 253 ntBASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gm15547-201ENSMUST00000122152 333 ntBASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gm30285-201ENSMUST00000214614 422 ntBASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gm8712-201ENSMUST00000221090 701 ntBASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gm9823-201ENSMUST00000051212 327 ntBASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cchcr1Q8K2I2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Gm12957-201ENSMUST00000117835 377 ntBASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms