Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.1□□□□□ -0.47
Clip4Q8CI96 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Gm13570-201ENSMUST00000140763 309 ntBASIC12.1□□□□□ -0.47
Clip4Q8CI96 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Gm39404-201ENSMUST00000216350 313 ntBASIC12.1□□□□□ -0.47
Clip4Q8CI96 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.1□□□□□ -0.47
Clip4Q8CI96 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Clip4Q8CI96 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.09□□□□□ -0.47
Clip4Q8CI96 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Mir877-201ENSMUST00000104738 85 ntBASIC12.09□□□□□ -0.47
Clip4Q8CI96 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.09□□□□□ -0.47
Clip4Q8CI96 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.09□□□□□ -0.47
Clip4Q8CI96 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Gm3096-201ENSMUST00000185770 364 ntBASIC12.09□□□□□ -0.47
Clip4Q8CI96 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.09□□□□□ -0.47
Clip4Q8CI96 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.09□□□□□ -0.47
Clip4Q8CI96 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.09□□□□□ -0.47
Clip4Q8CI96 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.09□□□□□ -0.47
Clip4Q8CI96 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.09□□□□□ -0.47
Clip4Q8CI96 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clip4Q8CI96 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.08□□□□□ -0.47
Clip4Q8CI96 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Clip4Q8CI96 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clip4Q8CI96 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clip4Q8CI96 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clip4Q8CI96 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clip4Q8CI96 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clip4Q8CI96 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clip4Q8CI96 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clip4Q8CI96 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Clip4Q8CI96 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.08□□□□□ -0.48
Clip4Q8CI96 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.08□□□□□ -0.48
Clip4Q8CI96 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clip4Q8CI96 Gm24231-201ENSMUST00000104315 133 ntBASIC12.08□□□□□ -0.48
Clip4Q8CI96 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clip4Q8CI96 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Clip4Q8CI96 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Clip4Q8CI96 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms