Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Gm4482-201ENSMUST00000200876 742 ntBASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Gm3786-201ENSMUST00000202659 378 ntBASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Spcs1-203ENSMUST00000226374 592 ntBASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf31Q8CCF0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Gm9062-201ENSMUST00000117712 727 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Gm14724-201ENSMUST00000118400 537 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Gm11660-201ENSMUST00000120955 412 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Gm8100-201ENSMUST00000182906 988 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Gm44100-201ENSMUST00000204329 436 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Gm17931-201ENSMUST00000208132 634 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.11□□□□□ -0.31
Prpf31Q8CCF0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Map1b-203ENSMUST00000223725 2669 ntBASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Gm7851-201ENSMUST00000117574 323 ntBASIC13.1□□□□□ -0.31
Prpf31Q8CCF0 Gm8566-201ENSMUST00000120174 465 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms