Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a6Q8C6K9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Gm14274-201ENSMUST00000117182 615 ntBASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Gm12990-201ENSMUST00000120372 468 ntBASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Gm23680-201ENSMUST00000083162 164 ntBASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Gm6390-201ENSMUST00000215034 589 ntBASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Col6a6Q8C6K9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Gm25554-201ENSMUST00000158075 113 ntBASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Gm25951-201ENSMUST00000175330 64 ntBASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a6Q8C6K9 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms