Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc60Q8C4J0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc60Q8C4J0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ccdc60Q8C4J0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Gm11509-201ENSMUST00000117358 325 ntBASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Gm29199-201ENSMUST00000187766 775 ntBASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Gm43807-201ENSMUST00000200678 1781 ntBASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc60Q8C4J0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Gm19817-201ENSMUST00000199764 2132 ntBASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Gm14277-201ENSMUST00000121195 360 ntBASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Gm5705-201ENSMUST00000066241 711 ntBASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc60Q8C4J0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms